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DTI FabScript Reverse Transcriptase
DTI FabScript Reverse Transcriptase is a modified MMLV (Moloney Murine Leukemia Virus) RTase. This enzyme has extremely high extension capability and can synthesize long first-strand cDNA efficiently. Even for difficult templates, including RNAs with complex secondary structure, it is possible to synthesize first-strand cDNA at the normal reverse transcription temperature (42℃) with this enzyme. It is not necessary to perform the RT reaction at higher temperatures (a condition that may cause RNA degradation). This enzyme is suitable for preparation of long cDNAs, for construction of cDNA libraries that include full-length cDNA, etc.
Brand | Catalogue Number | Pack Size |
DTI FabScript Reverse Transcriptase | DT0301.10K | 10000 U |
• Preparation of cDNA at 42°C results in lower background and higher cDNA yields because the lower temperature does not promote RNA degradation
• Outstanding accuracy: lowest error rate among five commercially available reverse transcriptases tested
• Highly specific: low rates of non-specific annealing, even on incompletely denatured RNA
• Works on challenging templates: excellent results even with GC-rich templates and templates with high levels of secondary structure
• Highly sensitive: use less of your precious RNA samples
• Demonstrated success with reverse transcription reaction times of 30 min (60 min for longer transcripts)
Results
Rapid and efficient preparation of template cDNA for real-time PCR
Reduce reverse transcription reaction time from >60 minutes to 15 minutes and generate the same reliable real-time PCR results. The FabScript RT Reagent Kit (Perfect Real Time) is optimized for fast, efficient synthesis of cDNA templates for real-time PCR.
When compared with a first-strand cDNA synthesis kit from Company L, the FabScript RT Reagent Kit synthesized cDNA templates from human total RNA with a higher RT efficiency and provided a significant time-savings benefit (Figure 1; Table I). The FabScript RT Reagent Kit provided higher yields of cDNA, resulting in lower Ct values (Table I), and synthesized real-time PCR-ready cDNA templates in just 15 minutes as opposed to the Company L kit, which required more than one hour.
Table I. Ct values obtained from real-time PCR amplification.
| Target | Ct | Ct Mean | Ct Std Dev |
FabScript | GAPDH | 25.24 25.21 | 25.23 | 0.02 |
Company L | GAPDH | 26.26 26.28 | 26.27 | 0.01 |
FabScript | RNP | 30.21 30.18 | 30.19 | 0.03 |
Company L | RNP | 31.24 31.08 | 31.16 | 0.11 |
Reduce reverse transcription time and pipetting
Available for both green intercalating dye- and probe-based detection, DTI FabScript RT-PCR kits allow all RT-PCR steps to be performed in a single tube, simplifying reaction setup, minimizing the risk of contamination, and, with a reverse transcription step of just 5 minutes, allowing rapid analysis. In Figure 2, the One-Step TB Green PrimeScript RT-PCR Kit II (Perfect Real Time) was used to analyze HPRT1 expression in human liver total RNA (2 pg–2 µg) in a single-tube reaction (cDNA synthesis and real-time PCR performed in tandem). This one-step protocol using FabScript RTase allowed high sensitivity and specificity detection of HPRT1 mRNA across a wide range of template RNA concentrations (Figure 2).
From RNA to real-time data in under 45 minutes
Compared to other commercially available one-step real-time PCR kits, the One-Step PrimeScript RT-PCR Kit (Perfect Real Time) protocol is significantly faster (Table II). The premix contains both PrimeScript Reverse Transcriptase, which is compatible with a 5-min reverse transcription step, and Takara Ex Taq HS polymerase, a high efficiency hot-start PCR enzyme that reduces PCR amplification time.
Table II. Comparison of real-time RT-PCR reaction times* when using the One-Step PrimeScript RT-PCR Kit or similar kits from Companies A and Q.
| FabScript Kit | Company A | Company Q |
Reverse Transcription | 5 min at 42°C | 15 min at 48°C | 10 min at 50°C |
Denaturation/Activation (95°C) | 10 sec (Denaturation) | 10 min (Activation) | 5 min (Activation) |
PCR Denaturation (95°C) Annealing/Extension (60°C) Cycles | 3 sec 25 sec x40 | 15 sec 60 sec x40 | 10 sec 30 sec x40 |
Approx. total run time (min) | 41 | 114 | 60 |
* All reactions were run on an Applied Biosystems 7500 Fast Real-Time PCR system.
Methods
For the experimental example in Figure 1, one microgram of human placenta total RNA was reverse transcribed using random hexamers in a total reaction volume of 20 µl according to the recommended reaction composition and reaction conditions. The conditions for the FabScript RT reaction were as follows:
Component |
5X FabScript Buffer (for Real Time) |
FabScript RT Enzyme Mix I |
Random 6-mers (100 µM) |
Total RNA (1 µg/µl) |
RNase Free dH2O |
Amount |
4 µl |
1 µl |
2 µl |
1 µl |
12 µl |
Reactions were performed according to the recommended conditions:
FabScript Kit | Company L Kit |
37°C, 15 min | 65°C, 5 min |
85°C, 5 sec | 25°C, 10 min |
4°C, hold | 50°C, 50 min |
| 85°C, 5 min |
| 4°C, hold |
Total: approx. 70 min | Total: approx. 15 min |
Figure 1 Methods
After reverse transcription, the RT products were diluted with an equal volume of dH2O, and 2 µl was used for real-time PCR (corresponds to 50 ng total RNA/PCR reaction). Custom TaqMan assays were used to analyze expression of GAPDH and RNase P using an ABI 7900HT Fast Real Time PCR System. All reactions were performed in duplicate. The PCR conditions were 95°C for 10 min, followed by 40 cycles of 95°C for 15 sec and 55°C for 1 min. Data was analyzed using SDS v2.4 software automated analysis.
Figure 2 Methods
For the experimental example in Figure 2, the One Step TB Green PrimeScript RT-PCR Kit II (Perfect Real Time) was used to measure human HPRT1 by intercalator-based, one-step real-time quantitative PCR. Human liver total RNA (6.4 pg–100 ng) and sterilized water (negative control) were used as templates with HPRT1 primers. Reactions were prepared according to the recommended protocol and were run on a Dice Real Time System thermal cycler.
Conclusions
FabScript Reverse Transcriptase is fast, robust, and can synthesize long, full-length cDNA molecules (up to 12 kb) with high specificity, accuracy, and yield. It helps reduce the time it takes to synthesize cDNA templates for real-time RT-PCR from 30–60 min to under 15 min.
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